Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NPIPA1Q9UND3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 LINC02447-202ENST00000501888 2146 ntBASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 AC010491.1-201ENST00000563101 2797 ntBASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 MEP1AP4-201ENST00000423244 1087 ntBASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 GIMAP3P-201ENST00000495150 836 ntBASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 MIR4321-201ENST00000592276 80 ntBASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NPIPA1Q9UND3 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC007950.2-201ENST00000615045 2347 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 CDC14C-201ENST00000428251 1719 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AL136982.4-201ENST00000437689 1740 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 HAUS4P1-201ENST00000406739 1145 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AL589987.1-201ENST00000453380 819 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 GPR53P-205ENST00000457298 1084 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC023310.3-201ENST00000557027 670 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC100756.1-201ENST00000562736 682 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC138749.3-201ENST00000567691 622 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms