Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
FOXD3Q9UJU5 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AC007274.1-201ENST00000439805 662 ntBASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 TTTY23B-201ENST00000442790 549 ntBASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AC132938.2-201ENST00000579188 680 ntBASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AL591163.1-201ENST00000641757 987 ntBASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 PAUPAR-201ENST00000630360 2965 ntBASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.07□□□□□ -0.16
FOXD3Q9UJU5 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 AC105917.1-201ENST00000506637 2539 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 PRAL-201ENST00000624952 3286 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 ACA64.2-201ENST00000459014 129 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 KRT17P8-201ENST00000540749 863 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 WASH4P-201ENST00000564273 1246 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 AC015936.2-201ENST00000593177 259 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 AL136379.1-201ENST00000623471 2642 ntBASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
FOXD3Q9UJU5 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms