Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 LINC02084-201ENST00000606069 1096 ntBASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 AC092127.1-201ENST00000567093 3455 ntBASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.94□□□□□ -0.02
KCMF1Q9P0J7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 RPL13P2-201ENST00000440687 659 ntBASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 MIR4745-201ENST00000577608 62 ntBASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AC074044.1-201ENST00000609673 707 ntBASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AC022144.1-201ENST00000602255 1580 ntBASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 AC105250.1-201ENST00000509378 2057 ntBASIC14.93□□□□□ -0.02
KCMF1Q9P0J7 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AC114501.2-201ENST00000439631 535 ntBASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AC008738.7-201ENST00000609744 511 ntBASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AF228730.6-201ENST00000641497 218 ntBASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 AC084121.3-201ENST00000641716 218 ntBASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.92□□□□□ -0.02
KCMF1Q9P0J7 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms