Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CLN6Q9NWW5 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 AL645939.2-201ENST00000427340 991 ntBASIC14.44□□□□□ -0.1
CLN6Q9NWW5 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 CXCL1P1-201ENST00000502804 216 ntBASIC14.44□□□□□ -0.1
CLN6Q9NWW5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.44□□□□□ -0.1
CLN6Q9NWW5 AC023024.2-201ENST00000623561 1993 ntBASIC14.43□□□□□ -0.1
CLN6Q9NWW5 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 GPX1P2-201ENST00000429271 606 ntBASIC14.43□□□□□ -0.1
CLN6Q9NWW5 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 AC002347.1-201ENST00000569543 541 ntBASIC14.43□□□□□ -0.1
CLN6Q9NWW5 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 AP002414.3-201ENST00000589352 1468 ntBASIC14.43□□□□□ -0.1
CLN6Q9NWW5 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CLN6Q9NWW5 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.42□□□□□ -0.1
CLN6Q9NWW5 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CLN6Q9NWW5 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms