Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 ZNF890P-202ENST00000530367 1156 ntBASIC15.66■□□□□ 0.1
TREX1Q9NSU2 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 AL158211.3-201ENST00000607385 239 ntBASIC15.66■□□□□ 0.1
TREX1Q9NSU2 AC139530.3-201ENST00000620344 690 ntBASIC15.66■□□□□ 0.1
TREX1Q9NSU2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 AGAP7P-201ENST00000582299 2062 ntBASIC15.66■□□□□ 0.1
TREX1Q9NSU2 AGAP14-201ENST00000624701 2060 ntBASIC15.66■□□□□ 0.1
TREX1Q9NSU2 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TREX1Q9NSU2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC011270.2-201ENST00000624293 2550 ntBASIC15.65■□□□□ 0.1
TREX1Q9NSU2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AL133267.1-201ENST00000398220 340 ntBASIC15.65■□□□□ 0.1
TREX1Q9NSU2 TOMM22P5-201ENST00000416399 439 ntBASIC15.65■□□□□ 0.1
TREX1Q9NSU2 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC097493.3-201ENST00000509725 367 ntBASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC027369.6-201ENST00000525520 931 ntBASIC15.65■□□□□ 0.1
TREX1Q9NSU2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 AL109936.8-201ENST00000641772 604 ntBASIC15.65■□□□□ 0.1
TREX1Q9NSU2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TREX1Q9NSU2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TREX1Q9NSU2 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.64■□□□□ 0.1
TREX1Q9NSU2 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 MROH4P-201ENST00000431302 1578 ntBASIC15.64■□□□□ 0.09
TREX1Q9NSU2 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 SDHAP3-202ENST00000515467 728 ntBASIC15.64■□□□□ 0.09
TREX1Q9NSU2 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TREX1Q9NSU2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms