Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR6727-201ENST00000620702 65 ntBASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.44■□□□□ 0.38
PDLIM7Q9NR12 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AL591846.1-201ENST00000451736 433 ntBASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AC022137.2-201ENST00000503482 481 ntBASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AC105129.2-201ENST00000559536 390 ntBASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AC005695.3-201ENST00000614522 232 ntBASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 AP005117.1-202ENST00000581724 1908 ntBASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDLIM7Q9NR12 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 AC000095.1-201ENST00000603208 874 ntBASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDLIM7Q9NR12 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 BTBD6P1-201ENST00000412176 1267 ntBASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 SCARNA20.5-201ENST00000516991 142 ntBASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AC025279.2-201ENST00000569730 653 ntBASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.41■□□□□ 0.38
PDLIM7Q9NR12 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms