Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
HMG20AQ9NP66 AC092127.1-201ENST00000567093 3455 ntBASIC14.4□□□□□ -0.1
HMG20AQ9NP66 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 KRT18P31-201ENST00000506277 1292 ntBASIC14.4□□□□□ -0.1
HMG20AQ9NP66 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 MTDHP3-201ENST00000594186 672 ntBASIC14.4□□□□□ -0.1
HMG20AQ9NP66 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.4□□□□□ -0.1
HMG20AQ9NP66 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 HSPA7-201ENST00000445535 1927 ntBASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AL928921.2-201ENST00000641325 2442 ntBASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AC064862.7-201ENST00000604520 867 ntBASIC14.39□□□□□ -0.11
HMG20AQ9NP66 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.39□□□□□ -0.11
HMG20AQ9NP66 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms