Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 AC003101.2-201ENST00000612557 442 ntBASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
UPF3BQ9BZI7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 AL353705.2-201ENST00000428243 662 ntBASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 NME4-207ENST00000450036 985 ntTSL 3 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 AC026150.2-201ENST00000564693 1156 ntBASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
UPF3BQ9BZI7 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 HIST3H2BA-201ENST00000436555 524 ntBASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 AP000344.2-201ENST00000512987 629 ntBASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
UPF3BQ9BZI7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms