Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 AL513190.1-201ENST00000621254 727 ntBASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 AC092865.6-201ENST00000642101 219 ntBASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.14■□□□□ 0.01
THUMPD3Q9BV44 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 AC009090.5-201ENST00000624886 2285 ntBASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 AC018892.3-201ENST00000623986 2499 ntBASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
THUMPD3Q9BV44 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 MIR574-201ENST00000385209 96 ntBASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 KRT18P58-201ENST00000527480 1120 ntBASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 PDPK2P-202ENST00000562415 1191 ntBASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 FAM45BP-202ENST00000592932 1624 ntBASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
THUMPD3Q9BV44 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms