Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.01□□□□□ -0.49
VGLL1Q99990 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 MRPL3P1-201ENST00000400109 1033 ntBASIC12.01□□□□□ -0.49
VGLL1Q99990 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 AC104692.2-201ENST00000603054 253 ntBASIC12.01□□□□□ -0.49
VGLL1Q99990 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC12.01□□□□□ -0.49
VGLL1Q99990 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
VGLL1Q99990 MYO15B-237ENST00000642007 4893 ntBASIC12.01□□□□□ -0.49
VGLL1Q99990 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
VGLL1Q99990 AC106881.1-201ENST00000605849 3329 ntBASIC12.01□□□□□ -0.49
VGLL1Q99990 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.01□□□□□ -0.49
VGLL1Q99990 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
VGLL1Q99990 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 GRK6P1-201ENST00000400595 1711 ntBASIC12□□□□□ -0.49
VGLL1Q99990 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 POR-201ENST00000394893 2532 ntTSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 TPM4P1-201ENST00000436100 807 ntBASIC12□□□□□ -0.49
VGLL1Q99990 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 AC079776.4-201ENST00000511039 504 ntBASIC12□□□□□ -0.49
VGLL1Q99990 RNA5SP419-201ENST00000515908 135 ntBASIC12□□□□□ -0.49
VGLL1Q99990 AL662844.1-201ENST00000546340 181 ntBASIC12□□□□□ -0.49
VGLL1Q99990 KRT19P2-202ENST00000557173 1012 ntBASIC12□□□□□ -0.49
VGLL1Q99990 AP001005.1-201ENST00000571755 1248 ntBASIC12□□□□□ -0.49
VGLL1Q99990 Z83851.2-201ENST00000609564 659 ntBASIC12□□□□□ -0.49
VGLL1Q99990 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12□□□□□ -0.49
VGLL1Q99990 AL161645.1-201ENST00000622716 1255 ntBASIC12□□□□□ -0.49
VGLL1Q99990 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12□□□□□ -0.49
VGLL1Q99990 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
VGLL1Q99990 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 AL359258.3-201ENST00000622910 2331 ntBASIC12□□□□□ -0.49
VGLL1Q99990 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12□□□□□ -0.49
VGLL1Q99990 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms