Protein–RNA interactions for Protein: Q99684

GFI1, Zinc finger protein Gfi-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1Q99684 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 AP000845.1-201ENST00000581677 2131 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
GFI1Q99684 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 AL031284.1-201ENST00000419297 478 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 AC142381.1-201ENST00000426099 345 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.57□□□□□ -0.24
GFI1Q99684 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
GFI1Q99684 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.57□□□□□ -0.24
GFI1Q99684 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 AP002472.1-201ENST00000577490 586 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.57□□□□□ -0.24
GFI1Q99684 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 AL691432.3-201ENST00000621860 400 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
GFI1Q99684 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 AC084364.1-201ENST00000551967 1556 ntBASIC13.57□□□□□ -0.24
GFI1Q99684 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GFI1Q99684 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GFI1Q99684 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.57□□□□□ -0.24
GFI1Q99684 HSPA7-201ENST00000445535 1927 ntBASIC13.56□□□□□ -0.24
GFI1Q99684 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
GFI1Q99684 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
GFI1Q99684 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
GFI1Q99684 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.56□□□□□ -0.24
GFI1Q99684 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.56□□□□□ -0.24
GFI1Q99684 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
GFI1Q99684 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.56□□□□□ -0.24
GFI1Q99684 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 AC136604.1-201ENST00000418535 575 ntBASIC13.56□□□□□ -0.24
GFI1Q99684 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.56□□□□□ -0.24
GFI1Q99684 RNA5SP419-201ENST00000515908 135 ntBASIC13.56□□□□□ -0.24
GFI1Q99684 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.56□□□□□ -0.24
GFI1Q99684 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.56□□□□□ -0.24
GFI1Q99684 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC13.56□□□□□ -0.24
GFI1Q99684 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.56□□□□□ -0.24
GFI1Q99684 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC13.56□□□□□ -0.24
GFI1Q99684 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.56□□□□□ -0.24
GFI1Q99684 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
GFI1Q99684 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms