Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRGV9Q99603 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV9Q99603 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV9Q99603 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV9Q99603 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV9Q99603 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV9Q99603 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV9Q99603 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV9Q99603 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
TRGV9Q99603 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.31□□□□□ -0.44
TRGV9Q99603 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.31□□□□□ -0.44
TRGV9Q99603 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRGV9Q99603 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRGV9Q99603 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 CICP23-201ENST00000605013 2741 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
TRGV9Q99603 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 AC136604.1-201ENST00000418535 575 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV9Q99603 SPDYE11-202ENST00000450699 704 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 IGHV3-62-201ENST00000520057 340 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV9Q99603 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV9Q99603 SPDYE9P-201ENST00000570642 692 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.3□□□□□ -0.44
TRGV9Q99603 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.3□□□□□ -0.44
TRGV9Q99603 SPDYE10P-202ENST00000612005 668 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 SPDYE8P-202ENST00000612377 668 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 IL9RP2-201ENST00000423948 1312 ntBASIC12.3□□□□□ -0.44
TRGV9Q99603 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC12.3□□□□□ -0.44
TRGV9Q99603 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRGV9Q99603 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
TRGV9Q99603 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TRGV9Q99603 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TRGV9Q99603 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.29□□□□□ -0.44
TRGV9Q99603 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms