Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
S1PR3Q99500 AC004461.1-201ENST00000412461 403 ntBASIC13.06□□□□□ -0.32
S1PR3Q99500 RPS8P6-201ENST00000426177 609 ntBASIC13.06□□□□□ -0.32
S1PR3Q99500 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.06□□□□□ -0.32
S1PR3Q99500 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.06□□□□□ -0.32
S1PR3Q99500 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.06□□□□□ -0.32
S1PR3Q99500 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.06□□□□□ -0.32
S1PR3Q99500 SNHG9-202ENST00000564014 471 ntBASIC13.06□□□□□ -0.32
S1PR3Q99500 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.06□□□□□ -0.32
S1PR3Q99500 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.06□□□□□ -0.32
S1PR3Q99500 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 AC079781.4-201ENST00000641908 219 ntBASIC13.06□□□□□ -0.32
S1PR3Q99500 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.06□□□□□ -0.32
S1PR3Q99500 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
S1PR3Q99500 AC013268.4-201ENST00000637413 2228 ntBASIC13.06□□□□□ -0.32
S1PR3Q99500 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.06□□□□□ -0.32
S1PR3Q99500 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.06□□□□□ -0.32
S1PR3Q99500 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
S1PR3Q99500 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.06□□□□□ -0.32
S1PR3Q99500 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
S1PR3Q99500 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 AC069335.1-201ENST00000489972 472 ntBASIC13.05□□□□□ -0.32
S1PR3Q99500 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.05□□□□□ -0.32
S1PR3Q99500 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 AL691403.2-201ENST00000618460 490 ntBASIC13.05□□□□□ -0.32
S1PR3Q99500 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 BNIP3P1-202ENST00000550043 1585 ntBASIC13.05□□□□□ -0.32
S1PR3Q99500 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
S1PR3Q99500 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
S1PR3Q99500 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 REXO1L1P-202ENST00000608646 1974 ntBASIC13.05□□□□□ -0.32
S1PR3Q99500 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.05□□□□□ -0.32
S1PR3Q99500 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
S1PR3Q99500 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms