Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 AC099336.1-201ENST00000417053 1171 ntBASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 AP001582.1-201ENST00000525856 295 ntBASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 AC107373.2-201ENST00000607735 490 ntBASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CCDC85AQ96PX6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AC024909.3-201ENST00000611513 2257 ntBASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 BOLA2P3-201ENST00000404566 256 ntBASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AC092658.1-201ENST00000505836 891 ntBASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC85AQ96PX6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 BAATP1-201ENST00000412284 1225 ntBASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC85AQ96PX6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 FAM86MP-201ENST00000340703 885 ntBASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 AC092933.1-201ENST00000393644 945 ntBASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 AL355864.2-201ENST00000447420 863 ntBASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 AC007551.1-201ENST00000457394 519 ntBASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 AC026410.3-201ENST00000514280 936 ntBASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms