Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AC015922.1-201ENST00000421102 1152 ntBASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AL390955.2-201ENST00000603032 514 ntBASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 AL390754.1-201ENST00000619088 582 ntBASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSPG4P5Q96PW8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.21■□□□□ 0.18
CSPG4P5Q96PW8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 AC023157.3-201ENST00000619086 2088 ntBASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 AC009477.1-201ENST00000452936 217 ntBASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 KRT8P44-201ENST00000441609 1350 ntBASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 DBET-201ENST00000630918 3363 ntBASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CSPG4P5Q96PW8 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 AC084364.1-201ENST00000551967 1556 ntBASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.19■□□□□ 0.18
CSPG4P5Q96PW8 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms