Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.22■□□□□ 0.19
RPRD1AQ96P16 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.21■□□□□ 0.19
RPRD1AQ96P16 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 API5-211ENST00000534695 560 ntTSL 5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 RARRES2P5-201ENST00000564013 466 ntBASIC16.21■□□□□ 0.19
RPRD1AQ96P16 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.21■□□□□ 0.19
RPRD1AQ96P16 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.21■□□□□ 0.19
RPRD1AQ96P16 AC092127.1-201ENST00000567093 3455 ntBASIC16.21■□□□□ 0.18
RPRD1AQ96P16 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
RPRD1AQ96P16 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.21■□□□□ 0.18
RPRD1AQ96P16 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
RPRD1AQ96P16 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC140912.1-201ENST00000577171 1054 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AL662799.1-202ENST00000614205 422 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC138969.3-201ENST00000546612 1459 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC138932.2-201ENST00000548268 1459 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 AC126755.4-201ENST00000549796 1459 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 HYMAI-201ENST00000635591 3347 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPRD1AQ96P16 PAUPAR-201ENST00000630360 2965 ntBASIC16.2■□□□□ 0.18
RPRD1AQ96P16 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 AC022188.1-201ENST00000620960 1664 ntBASIC16.19■□□□□ 0.18
RPRD1AQ96P16 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 COX20P2-201ENST00000452636 358 ntBASIC16.19■□□□□ 0.18
RPRD1AQ96P16 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPRD1AQ96P16 AC036164.1-201ENST00000570544 333 ntBASIC16.19■□□□□ 0.18
RPRD1AQ96P16 SPDYE22P-201ENST00000582158 798 ntBASIC16.19■□□□□ 0.18
RPRD1AQ96P16 AC027307.3-201ENST00000594262 1100 ntBASIC16.19■□□□□ 0.18
RPRD1AQ96P16 CHCHD2P3-201ENST00000603038 451 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms