Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 BTBD6P1-201ENST00000412176 1267 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX27Q96L92 TMEM14DP-201ENST00000422205 345 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 AC134915.1-201ENST00000426461 574 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 AL162726.2-201ENST00000438986 1017 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 TTTY23B-201ENST00000442790 549 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX27Q96L92 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.91■□□□□ 0.3
SNX27Q96L92 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX27Q96L92 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 AL139099.5-201ENST00000635274 300 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 PCDHA1-201ENST00000378133 2726 ntBASIC16.91■□□□□ 0.3
SNX27Q96L92 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX27Q96L92 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SNX27Q96L92 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.91■□□□□ 0.3
SNX27Q96L92 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.91■□□□□ 0.3
SNX27Q96L92 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX27Q96L92 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
SNX27Q96L92 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX27Q96L92 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX27Q96L92 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX27Q96L92 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX27Q96L92 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.9■□□□□ 0.3
SNX27Q96L92 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC16.9■□□□□ 0.3
SNX27Q96L92 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.9■□□□□ 0.3
SNX27Q96L92 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SNX27Q96L92 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SNX27Q96L92 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SNX27Q96L92 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SNX27Q96L92 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX27Q96L92 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.89■□□□□ 0.3
SNX27Q96L92 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX27Q96L92 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
SNX27Q96L92 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SNX27Q96L92 KRT8P22-201ENST00000562317 1415 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SNX27Q96L92 AL365203.3-201ENST00000609742 2057 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 AC234644.1-201ENST00000406065 370 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX27Q96L92 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SNX27Q96L92 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.89■□□□□ 0.29
SNX27Q96L92 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SNX27Q96L92 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX27Q96L92 AC007389.4-201ENST00000454674 793 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.89■□□□□ 0.29
SNX27Q96L92 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.89■□□□□ 0.29
SNX27Q96L92 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SNX27Q96L92 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.89■□□□□ 0.29
SNX27Q96L92 AC010319.3-201ENST00000597028 470 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 AC106872.11-201ENST00000605838 421 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.89■□□□□ 0.29
SNX27Q96L92 CU634019.7-201ENST00000624153 1185 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 FP236241.2-201ENST00000624906 1185 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.89■□□□□ 0.29
SNX27Q96L92 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.89■□□□□ 0.29
SNX27Q96L92 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.89■□□□□ 0.29
SNX27Q96L92 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SNX27Q96L92 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms