Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM5Q96HC4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 AL645728.2-202ENST00000641679 227 ntBASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
PDLIM5Q96HC4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 MROH4P-201ENST00000431302 1578 ntBASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 KRT18P64-201ENST00000434946 1219 ntBASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 AC027369.6-201ENST00000525520 931 ntBASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM5Q96HC4 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 AC023024.2-201ENST00000623561 1993 ntBASIC15.33■□□□□ 0.05
PDLIM5Q96HC4 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.33■□□□□ 0.04
PDLIM5Q96HC4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms