Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.51■□□□□ 0.23
USP13Q92995 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC16.51■□□□□ 0.23
USP13Q92995 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.51■□□□□ 0.23
USP13Q92995 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.51■□□□□ 0.23
USP13Q92995 AC017083.2-201ENST00000608069 979 ntBASIC16.51■□□□□ 0.23
USP13Q92995 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 AL158212.4-201ENST00000624062 1286 ntBASIC16.51■□□□□ 0.23
USP13Q92995 AL033527.5-201ENST00000641382 801 ntBASIC16.51■□□□□ 0.23
USP13Q92995 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
USP13Q92995 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.51■□□□□ 0.23
USP13Q92995 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
USP13Q92995 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
USP13Q92995 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.5■□□□□ 0.23
USP13Q92995 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
USP13Q92995 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.5■□□□□ 0.23
USP13Q92995 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.5■□□□□ 0.23
USP13Q92995 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.5■□□□□ 0.23
USP13Q92995 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.5■□□□□ 0.23
USP13Q92995 RAB43P1-201ENST00000561790 589 ntBASIC16.5■□□□□ 0.23
USP13Q92995 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.5■□□□□ 0.23
USP13Q92995 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.5■□□□□ 0.23
USP13Q92995 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.5■□□□□ 0.23
USP13Q92995 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 AC024909.3-201ENST00000611513 2257 ntBASIC16.5■□□□□ 0.23
USP13Q92995 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.5■□□□□ 0.23
USP13Q92995 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
USP13Q92995 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.5■□□□□ 0.23
USP13Q92995 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP13Q92995 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP13Q92995 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
USP13Q92995 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP13Q92995 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.49■□□□□ 0.23
USP13Q92995 AC007389.4-201ENST00000454674 793 ntBASIC16.49■□□□□ 0.23
USP13Q92995 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP13Q92995 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP13Q92995 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.49■□□□□ 0.23
USP13Q92995 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.49■□□□□ 0.23
USP13Q92995 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.49■□□□□ 0.23
USP13Q92995 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.49■□□□□ 0.23
USP13Q92995 MTHFR-217ENST00000641820 1569 ntBASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms