Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 RPL13P2-201ENST00000440687 659 ntBASIC16.73■□□□□ 0.27
DDX1Q92499 SERBP1P3-201ENST00000459980 809 ntBASIC16.73■□□□□ 0.27
DDX1Q92499 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.73■□□□□ 0.27
DDX1Q92499 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.73■□□□□ 0.27
DDX1Q92499 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.73■□□□□ 0.27
DDX1Q92499 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.73■□□□□ 0.27
DDX1Q92499 AC073592.8-201ENST00000624126 511 ntBASIC16.73■□□□□ 0.27
DDX1Q92499 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.73■□□□□ 0.27
DDX1Q92499 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 AC091951.1-201ENST00000512854 2465 ntBASIC16.73■□□□□ 0.27
DDX1Q92499 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.73■□□□□ 0.27
DDX1Q92499 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DDX1Q92499 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 AC126365.1-201ENST00000578585 1514 ntBASIC16.72■□□□□ 0.27
DDX1Q92499 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.72■□□□□ 0.27
DDX1Q92499 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.72■□□□□ 0.27
DDX1Q92499 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.72■□□□□ 0.27
DDX1Q92499 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.72■□□□□ 0.27
DDX1Q92499 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.72■□□□□ 0.27
DDX1Q92499 AC017083.2-201ENST00000608069 979 ntBASIC16.72■□□□□ 0.27
DDX1Q92499 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 AC006058.4-201ENST00000624016 1670 ntBASIC16.72■□□□□ 0.27
DDX1Q92499 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DDX1Q92499 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
DDX1Q92499 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.72■□□□□ 0.27
DDX1Q92499 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.71■□□□□ 0.27
DDX1Q92499 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.71■□□□□ 0.27
DDX1Q92499 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
DDX1Q92499 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.71■□□□□ 0.27
DDX1Q92499 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.71■□□□□ 0.27
DDX1Q92499 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.71■□□□□ 0.27
DDX1Q92499 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.71■□□□□ 0.27
DDX1Q92499 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.71■□□□□ 0.27
DDX1Q92499 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.71■□□□□ 0.27
DDX1Q92499 LINC01115-203ENST00000606068 577 ntBASIC16.71■□□□□ 0.27
DDX1Q92499 AL844908.2-201ENST00000609461 460 ntBASIC16.71■□□□□ 0.27
DDX1Q92499 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.71■□□□□ 0.27
DDX1Q92499 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.71■□□□□ 0.27
DDX1Q92499 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DDX1Q92499 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.71■□□□□ 0.27
DDX1Q92499 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.71■□□□□ 0.26
DDX1Q92499 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
DDX1Q92499 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms