Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
PRUNE2Q8WUY3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.02■□□□□ 0.16
PRUNE2Q8WUY3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRUNE2Q8WUY3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRUNE2Q8WUY3 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRUNE2Q8WUY3 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PRUNE2Q8WUY3 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRUNE2Q8WUY3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 AL627231.1-201ENST00000394467 1125 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 KRT17P4-201ENST00000429445 819 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 AC026803.1-201ENST00000569130 274 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 MST1L-201ENST00000442552 2185 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 HNRNPA1P42-201ENST00000458678 957 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 AC106820.3-201ENST00000561653 397 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 KRT8P21-201ENST00000430398 1491 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 AL158070.2-201ENST00000623713 1621 ntBASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.01■□□□□ 0.15
PRUNE2Q8WUY3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 PSMD4P1-201ENST00000433951 1109 ntBASIC16■□□□□ 0.15
PRUNE2Q8WUY3 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC097359.3-201ENST00000603982 1210 ntBASIC16■□□□□ 0.15
PRUNE2Q8WUY3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 ACTBP8-201ENST00000403258 1108 ntBASIC16■□□□□ 0.15
PRUNE2Q8WUY3 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16■□□□□ 0.15
PRUNE2Q8WUY3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC053503.3-201ENST00000448375 114 ntBASIC16■□□□□ 0.15
PRUNE2Q8WUY3 AC005041.3-201ENST00000606287 649 ntBASIC16■□□□□ 0.15
PRUNE2Q8WUY3 TP53-221ENST00000615910 1149 ntTSL 5 BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRUNE2Q8WUY3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRUNE2Q8WUY3 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms