Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC138649.4-201ENST00000612222 287 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PCDH19Q8TAB3 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 TREML5P-201ENST00000421694 576 ntBASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 BASP1P1-201ENST00000430708 665 ntBASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 KRT8P44-201ENST00000441609 1350 ntBASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.24■□□□□ 0.19
PCDH19Q8TAB3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AC103702.1-201ENST00000548801 2630 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 TSPY26P-202ENST00000565928 3884 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AL035633.1-201ENST00000406139 838 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 INGX-202ENST00000489074 768 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AC097493.3-201ENST00000509725 367 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 IGHV3-42-201ENST00000520410 361 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AC027369.6-201ENST00000525520 931 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 MIR4745-201ENST00000577608 62 ntBASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PCDH19Q8TAB3 AJ011932.1-201ENST00000621707 465 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms