Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 AL589702.1-201ENST00000641229 1509 ntBASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 AL390755.1-201ENST00000623716 2027 ntBASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 AC232323.1-201ENST00000540724 2099 ntBASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 REXO1L5P-201ENST00000622260 2098 ntBASIC14.85□□□□□ -0.03
PIK3C3Q8NEB9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AC073439.1-201ENST00000624121 1774 ntBASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AL022342.1-201ENST00000400363 863 ntBASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AC002347.1-201ENST00000569543 541 ntBASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AGAP7P-201ENST00000582299 2062 ntBASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 AGAP14-201ENST00000624701 2060 ntBASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
PIK3C3Q8NEB9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
PIK3C3Q8NEB9 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 AC139749.1-202ENST00000617529 3139 ntBASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
PIK3C3Q8NEB9 KRT18P3-201ENST00000451602 1288 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms