Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFAP43Q8NDM7 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 AC148477.4-201ENST00000613430 1793 ntBASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 SMS-201ENST00000379404 1174 ntTSL 3 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 AL354877.1-201ENST00000424412 413 ntBASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 AC069218.1-201ENST00000435269 762 ntBASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 AL133466.1-201ENST00000447582 150 ntBASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 COX5BP1-201ENST00000507622 393 ntBASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 ETV2-208ENST00000621247 941 ntTSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC24.06■■□□□ 1.44
CFAP43Q8NDM7 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AF254983.2-201ENST00000612331 135 ntBASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AC010491.1-201ENST00000563101 2797 ntBASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 ACTG1P2-201ENST00000415776 1125 ntBASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 KLF2P2-201ENST00000416807 1039 ntBASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 ACTG1P11-201ENST00000425411 1125 ntBASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 AC007663.3-201ENST00000609632 465 ntBASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC24.05■■□□□ 1.44
CFAP43Q8NDM7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 ATP6V0CP2-201ENST00000469409 207 ntBASIC24.04■■□□□ 1.44
CFAP43Q8NDM7 AC104784.1-201ENST00000473096 294 ntBASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms