Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
COMMD1Q8N668 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
COMMD1Q8N668 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 MROH4P-201ENST00000431302 1578 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AC005252.3-201ENST00000623855 2258 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 SNHG9-202ENST00000564014 471 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 MIR4469-201ENST00000583919 79 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AL078644.1-201ENST00000609881 752 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AC091812.2-201ENST00000619081 385 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 AC134684.3-201ENST00000641758 218 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AC087386.2-201ENST00000623212 4637 ntBASIC13.17□□□□□ -0.3
COMMD1Q8N668 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
COMMD1Q8N668 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
COMMD1Q8N668 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
COMMD1Q8N668 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
COMMD1Q8N668 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms