Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS52Q8N1B4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VPS52Q8N1B4 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS52Q8N1B4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC17.13■□□□□ 0.33
VPS52Q8N1B4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
VPS52Q8N1B4 CDC14C-201ENST00000428251 1719 ntBASIC17.13■□□□□ 0.33
VPS52Q8N1B4 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.13■□□□□ 0.33
VPS52Q8N1B4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AC005052.1-201ENST00000625181 2492 ntBASIC17.12■□□□□ 0.33
VPS52Q8N1B4 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AL513523.2-202ENST00000427283 2040 ntBASIC17.12■□□□□ 0.33
VPS52Q8N1B4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VPS52Q8N1B4 AC007950.2-201ENST00000615045 2347 ntBASIC17.12■□□□□ 0.33
VPS52Q8N1B4 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VPS52Q8N1B4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 NSL1-201ENST00000366976 722 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 AC234783.1-201ENST00000441761 496 ntBASIC17.1■□□□□ 0.33
VPS52Q8N1B4 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.1■□□□□ 0.33
VPS52Q8N1B4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms