Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AC134915.1-201ENST00000426461 574 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 KRT223P-202ENST00000449164 1292 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 TDH-203ENST00000531764 1110 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 MIR6775-201ENST00000617557 69 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 MIR6799-201ENST00000620297 69 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 COX11-210ENST00000639671 696 ntBASIC16.02■□□□□ 0.16
CHPFQ8IZ52 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.02■□□□□ 0.16
CHPFQ8IZ52 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 AC022188.1-201ENST00000620960 1664 ntBASIC16.02■□□□□ 0.15
CHPFQ8IZ52 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHPFQ8IZ52 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AL513523.2-202ENST00000427283 2040 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 INTS4P2-202ENST00000614726 2019 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC136604.1-201ENST00000418535 575 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 USP32P1-208ENST00000506594 1164 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC104989.1-201ENST00000519711 778 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SLC25A47P1-201ENST00000531577 414 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 HNRNPUP1-201ENST00000554987 333 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MIR4259-201ENST00000584466 101 ntBASIC16.01■□□□□ 0.15
CHPFQ8IZ52 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.01■□□□□ 0.15
CHPFQ8IZ52 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms