Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.52■□□□□ 0.07
TRIM48Q8IWZ4 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AL596087.1-201ENST00000400979 1969 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AC087499.6-201ENST00000411576 835 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 DFFBP1-201ENST00000433250 979 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 EEF1DP4-201ENST00000446006 880 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AL662799.1-202ENST00000614205 422 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AL358472.5-202ENST00000641448 1267 ntBASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM48Q8IWZ4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AC007950.2-201ENST00000615045 2347 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 REXO1L1P-202ENST00000608646 1974 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AL353779.1-201ENST00000434793 351 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 SPDYE18-201ENST00000510091 1050 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AL450472.2-201ENST00000603663 1156 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AF228730.6-201ENST00000641497 218 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AC084121.3-201ENST00000641716 218 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AC105233.6-201ENST00000642093 218 ntBASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM48Q8IWZ4 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms