Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
LRRTM4Q86VH4 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 RN7SL692P-201ENST00000464677 288 ntBASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 FAM86LP-201ENST00000478302 853 ntBASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AP005018.1-201ENST00000525475 301 ntBASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AC015910.1-201ENST00000579400 975 ntBASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AC022188.1-201ENST00000620960 1664 ntBASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 AC068587.6-202ENST00000641839 5619 ntBASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
LRRTM4Q86VH4 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 DGCR5-201ENST00000399539 862 ntBASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 WASH4P-201ENST00000564273 1246 ntBASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 AC000095.1-201ENST00000603208 874 ntBASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
LRRTM4Q86VH4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms