Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 CHCHD2P8-201ENST00000429873 447 ntBASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MINOS1P3-201ENST00000457048 203 ntBASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AC096582.2-201ENST00000510860 516 ntBASIC13.16□□□□□ -0.3
ZNF546Q86UE3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 Z69720.1-201ENST00000601483 472 ntBASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AL353732.1-201ENST00000569618 1459 ntBASIC13.16□□□□□ -0.3
ZNF546Q86UE3 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 INTS4P1-201ENST00000438455 1935 ntBASIC13.15□□□□□ -0.3
ZNF546Q86UE3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 BX276092.5-203ENST00000456199 560 ntBASIC13.15□□□□□ -0.3
ZNF546Q86UE3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 NTF6B-201ENST00000591913 560 ntBASIC13.15□□□□□ -0.3
ZNF546Q86UE3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 AL121672.3-201ENST00000608644 468 ntBASIC13.15□□□□□ -0.3
ZNF546Q86UE3 AP001350.2-201ENST00000625104 1094 ntBASIC13.15□□□□□ -0.3
ZNF546Q86UE3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 COL6A4P2-202ENST00000504443 2753 ntBASIC13.15□□□□□ -0.3
ZNF546Q86UE3 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF546Q86UE3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
ZNF546Q86UE3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF546Q86UE3 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms