Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 AL161773.1-201ENST00000624845 863 ntBASIC12.95□□□□□ -0.34
CSMD2Q7Z408 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 TPM3P8-201ENST00000330554 643 ntBASIC12.95□□□□□ -0.34
CSMD2Q7Z408 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 RPS9P1-201ENST00000419943 583 ntBASIC12.95□□□□□ -0.34
CSMD2Q7Z408 ISCA2P1-201ENST00000425548 448 ntBASIC12.95□□□□□ -0.34
CSMD2Q7Z408 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 FAM8A4P-201ENST00000435433 1213 ntBASIC12.95□□□□□ -0.34
CSMD2Q7Z408 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.95□□□□□ -0.34
CSMD2Q7Z408 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 LINC01144-201ENST00000626198 1710 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 DNM1P51-201ENST00000558149 522 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 AC242376.2-201ENST00000619355 883 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 MIR6858-201ENST00000620733 67 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 CHMP1AP1-201ENST00000445563 662 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 AC073150.1-201ENST00000450406 1084 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 RCC2P8-201ENST00000502779 1035 ntBASIC12.94□□□□□ -0.34
CSMD2Q7Z408 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 DCTPP1-202ENST00000565758 749 ntTSL 3 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CSMD2Q7Z408 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD2Q7Z408 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms