Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC012362.1-201ENST00000434906 739 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 FAM8A4P-201ENST00000435433 1213 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AL391280.1-201ENST00000506969 1062 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 ZACNP1-201ENST00000612259 710 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 AC132938.4-201ENST00000623835 848 ntBASIC10.73□□□□□ -0.69
CSMD3Q7Z407 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC10.73□□□□□ -0.69
CSMD3Q7Z407 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 FLII-221ENST00000578558 2377 ntTSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 NEU3-205ENST00000531619 582 ntTSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 NPM1P43-201ENST00000558669 786 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 DNM1P30-201ENST00000563586 452 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC091544.8-201ENST00000619490 361 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC068587.8-201ENST00000641239 219 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC006335.1-201ENST00000445200 547 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AP001065.2-201ENST00000617205 644 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC148477.9-201ENST00000623974 539 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 CEP83-AS1-201ENST00000623122 2482 ntBASIC10.72□□□□□ -0.69
CSMD3Q7Z407 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC10.72□□□□□ -0.69
CSMD3Q7Z407 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 AC026316.1-201ENST00000398900 414 ntBASIC10.71□□□□□ -0.69
CSMD3Q7Z407 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
CSMD3Q7Z407 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.71□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms