Protein–RNA interactions for Protein: Q6ZSY5

PPP1R3F, Protein phosphatase 1 regulatory subunit 3F, humanhuman

Predicted RBP Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3FQ6ZSY5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 AL133267.1-201ENST00000398220 340 ntBASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 AL590640.2-201ENST00000457038 527 ntBASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 RPSAP36-202ENST00000494591 1261 ntBASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 NEU3-202ENST00000526068 431 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PPP1R3FQ6ZSY5 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 MIR1202-201ENST00000408529 83 ntBASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 HOMER2P2-201ENST00000451621 847 ntBASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 AP006547.1-201ENST00000563435 692 ntBASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 AC244452.3-201ENST00000636814 210 ntBASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 AC103702.1-201ENST00000548801 2630 ntBASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PPP1R3FQ6ZSY5 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 AC004898.1-201ENST00000451057 766 ntBASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 KRT18P25-201ENST00000508931 1278 ntBASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 RNA5SP486-201ENST00000515961 83 ntBASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC18.3■□□□□ 0.52
PPP1R3FQ6ZSY5 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms