Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC013355.1-201ENST00000562625 723 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC012618.1-201ENST00000461223 412 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AL157813.1-201ENST00000612996 587 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC024909.3-201ENST00000611513 2257 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC114501.1-201ENST00000445949 172 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AC009779.1-201ENST00000551138 283 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 DNM1P30-201ENST00000563586 452 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 AL023803.2-201ENST00000620080 638 ntBASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
VPS13DQ5THJ4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC125604.1-201ENST00000496255 707 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC005324.6-201ENST00000587972 613 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AC138696.2-201ENST00000607376 223 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AL353770.1-201ENST00000614915 403 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 AL139384.1-201ENST00000612143 3047 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 EEF1DP6-201ENST00000449232 372 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 FKBP4P6-201ENST00000457486 1332 ntBASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
VPS13DQ5THJ4 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
VPS13DQ5THJ4 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC10.28□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms