Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 AC008805.1-201ENST00000590892 364 ntBASIC13.41□□□□□ -0.26
LRRK2Q5S007 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 MIR6858-201ENST00000620733 67 ntBASIC13.41□□□□□ -0.26
LRRK2Q5S007 MME-218ENST00000625667 363 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRK2Q5S007 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRK2Q5S007 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AL592424.1-201ENST00000563624 1536 ntBASIC13.4□□□□□ -0.26
LRRK2Q5S007 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AC018695.6-201ENST00000614011 534 ntBASIC13.4□□□□□ -0.26
LRRK2Q5S007 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AC134407.2-201ENST00000625089 1978 ntBASIC13.4□□□□□ -0.26
LRRK2Q5S007 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AP000356.3-201ENST00000382243 753 ntBASIC13.4□□□□□ -0.26
LRRK2Q5S007 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 MIR5196-201ENST00000578146 115 ntBASIC13.4□□□□□ -0.26
LRRK2Q5S007 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRK2Q5S007 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRK2Q5S007 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
LRRK2Q5S007 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.4□□□□□ -0.27
LRRK2Q5S007 HYMAI-201ENST00000635591 3347 ntBASIC13.4□□□□□ -0.27
LRRK2Q5S007 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 KRT8P29-201ENST00000420409 1371 ntBASIC13.39□□□□□ -0.27
LRRK2Q5S007 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 HCG27-204ENST00000424675 895 ntTSL 3 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 AC018463.1-201ENST00000456674 917 ntBASIC13.39□□□□□ -0.27
LRRK2Q5S007 RPL18AP3-201ENST00000462885 528 ntBASIC13.39□□□□□ -0.27
LRRK2Q5S007 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 AC015909.3-201ENST00000572855 1794 ntBASIC13.39□□□□□ -0.27
LRRK2Q5S007 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.39□□□□□ -0.27
LRRK2Q5S007 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRK2Q5S007 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.38□□□□□ -0.27
LRRK2Q5S007 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LRRK2Q5S007 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms