Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AL080243.2-201ENST00000418783 582 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 TSSK5P-201ENST00000423978 907 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 HNRNPUP1-201ENST00000554987 333 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 TP53TG3HP-202ENST00000569755 579 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AC097359.3-201ENST00000603982 1210 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AL590560.3-201ENST00000623350 461 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 TSPY26P-202ENST00000565928 3884 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AC100757.3-201ENST00000622361 1406 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 AC022144.1-201ENST00000602255 1580 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HERC4Q5GLZ8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 HLA-V-204ENST00000476601 1289 ntBASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 AL138828.2-201ENST00000615812 383 ntBASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 SPDYE12P-201ENST00000618416 771 ntBASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.59■□□□□ 0.41
HERC4Q5GLZ8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HERC4Q5GLZ8 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HERC4Q5GLZ8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms