Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC108073.2-201ENST00000464002 357 ntBASIC14.17□□□□□ -0.14
CCDC58Q4VC31 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC073869.1-201ENST00000415574 2762 ntBASIC14.17□□□□□ -0.14
CCDC58Q4VC31 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 AC099521.3-201ENST00000624251 2938 ntBASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC58Q4VC31 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 LINC00552-201ENST00000625151 2579 ntBASIC14.16□□□□□ -0.14
CCDC58Q4VC31 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 AC026396.1-201ENST00000419388 421 ntBASIC14.16□□□□□ -0.14
CCDC58Q4VC31 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 AL513480.1-201ENST00000451731 511 ntBASIC14.16□□□□□ -0.14
CCDC58Q4VC31 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 AC002347.1-201ENST00000569543 541 ntBASIC14.16□□□□□ -0.14
CCDC58Q4VC31 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 OR2I1P-209ENST00000641730 5365 ntBASIC14.16□□□□□ -0.14
CCDC58Q4VC31 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC58Q4VC31 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 C18orf15-201ENST00000623680 2534 ntBASIC14.15□□□□□ -0.14
CCDC58Q4VC31 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC58Q4VC31 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 368.9 ms