Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.02■□□□□ 0.48
USH1GQ495M9 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
USH1GQ495M9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
USH1GQ495M9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
USH1GQ495M9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.02■□□□□ 0.47
USH1GQ495M9 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.47
USH1GQ495M9 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
USH1GQ495M9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
USH1GQ495M9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.01■□□□□ 0.47
USH1GQ495M9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USH1GQ495M9 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 AC112492.5-201ENST00000421897 457 ntBASIC18.01■□□□□ 0.47
USH1GQ495M9 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.01■□□□□ 0.47
USH1GQ495M9 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC18.01■□□□□ 0.47
USH1GQ495M9 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.01■□□□□ 0.47
USH1GQ495M9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.01■□□□□ 0.47
USH1GQ495M9 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.01■□□□□ 0.47
USH1GQ495M9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 AC008735.3-201ENST00000596646 500 ntBASIC18.01■□□□□ 0.47
USH1GQ495M9 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.01■□□□□ 0.47
USH1GQ495M9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.01■□□□□ 0.47
USH1GQ495M9 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 TKT-202ENST00000423516 2075 ntTSL 2 BASIC18.01■□□□□ 0.47
USH1GQ495M9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
USH1GQ495M9 AL513523.2-202ENST00000427283 2040 ntBASIC18.01■□□□□ 0.47
USH1GQ495M9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.01■□□□□ 0.47
USH1GQ495M9 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
USH1GQ495M9 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
USH1GQ495M9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18■□□□□ 0.47
USH1GQ495M9 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
USH1GQ495M9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 ARSEP1-201ENST00000420443 635 ntBASIC18■□□□□ 0.47
USH1GQ495M9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18■□□□□ 0.47
USH1GQ495M9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18■□□□□ 0.47
USH1GQ495M9 AL162726.2-201ENST00000438986 1017 ntBASIC18■□□□□ 0.47
USH1GQ495M9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC18■□□□□ 0.47
USH1GQ495M9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18■□□□□ 0.47
USH1GQ495M9 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 KRT17P8-201ENST00000540749 863 ntBASIC18■□□□□ 0.47
USH1GQ495M9 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 AC120045.2-201ENST00000567334 178 ntBASIC18■□□□□ 0.47
USH1GQ495M9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18■□□□□ 0.47
USH1GQ495M9 AC124283.3-201ENST00000570869 594 ntBASIC18■□□□□ 0.47
USH1GQ495M9 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18■□□□□ 0.47
USH1GQ495M9 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC18■□□□□ 0.47
USH1GQ495M9 AC000095.1-201ENST00000603208 874 ntBASIC18■□□□□ 0.47
USH1GQ495M9 AL008721.1-201ENST00000609964 604 ntBASIC18■□□□□ 0.47
USH1GQ495M9 ABBA01031660.1-201ENST00000635219 756 ntBASIC18■□□□□ 0.47
USH1GQ495M9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
USH1GQ495M9 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
USH1GQ495M9 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.99■□□□□ 0.47
USH1GQ495M9 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
USH1GQ495M9 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.99■□□□□ 0.47
USH1GQ495M9 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
USH1GQ495M9 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms