Protein–RNA interactions for Protein: Q3C1V8

BSX, Brain-specific homeobox protein homolog, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BSXQ3C1V8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
BSXQ3C1V8 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BSXQ3C1V8 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC12.79□□□□□ -0.36
BSXQ3C1V8 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
BSXQ3C1V8 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC12.79□□□□□ -0.36
BSXQ3C1V8 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 DKFZP434A062-201ENST00000573103 5021 ntBASIC12.78□□□□□ -0.36
BSXQ3C1V8 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AC105250.1-201ENST00000509378 2057 ntBASIC12.78□□□□□ -0.36
BSXQ3C1V8 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 RNA5SP419-201ENST00000515908 135 ntBASIC12.78□□□□□ -0.36
BSXQ3C1V8 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
BSXQ3C1V8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
BSXQ3C1V8 AC232323.1-201ENST00000540724 2099 ntBASIC12.77□□□□□ -0.36
BSXQ3C1V8 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.77□□□□□ -0.36
BSXQ3C1V8 REXO1L5P-201ENST00000622260 2098 ntBASIC12.77□□□□□ -0.36
BSXQ3C1V8 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.77□□□□□ -0.36
BSXQ3C1V8 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.77□□□□□ -0.36
BSXQ3C1V8 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.77□□□□□ -0.36
BSXQ3C1V8 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
BSXQ3C1V8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
BSXQ3C1V8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BSXQ3C1V8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BSXQ3C1V8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
BSXQ3C1V8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.77□□□□□ -0.37
BSXQ3C1V8 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
BSXQ3C1V8 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
BSXQ3C1V8 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC12.77□□□□□ -0.37
BSXQ3C1V8 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms