Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNA1Q09470 BCRP1-201ENST00000444246 691 ntBASIC17.28■□□□□ 0.36
KCNA1Q09470 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.28■□□□□ 0.36
KCNA1Q09470 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.28■□□□□ 0.36
KCNA1Q09470 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.28■□□□□ 0.36
KCNA1Q09470 INGX-202ENST00000489074 768 ntBASIC17.28■□□□□ 0.36
KCNA1Q09470 SLED1-202ENST00000512051 380 ntBASIC17.28■□□□□ 0.36
KCNA1Q09470 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.28■□□□□ 0.36
KCNA1Q09470 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.28■□□□□ 0.36
KCNA1Q09470 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KCNA1Q09470 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNA1Q09470 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.28■□□□□ 0.36
KCNA1Q09470 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KCNA1Q09470 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
KCNA1Q09470 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.28■□□□□ 0.36
KCNA1Q09470 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNA1Q09470 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.28■□□□□ 0.36
KCNA1Q09470 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KCNA1Q09470 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KCNA1Q09470 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.28■□□□□ 0.36
KCNA1Q09470 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNA1Q09470 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KCNA1Q09470 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KCNA1Q09470 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KCNA1Q09470 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC17.27■□□□□ 0.36
KCNA1Q09470 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
KCNA1Q09470 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
KCNA1Q09470 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KCNA1Q09470 AC087481.3-201ENST00000602886 1894 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KCNA1Q09470 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 BTBD7P1-201ENST00000447253 1453 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.27■□□□□ 0.36
KCNA1Q09470 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
KCNA1Q09470 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.27■□□□□ 0.36
KCNA1Q09470 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KCNA1Q09470 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.27■□□□□ 0.36
KCNA1Q09470 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.27■□□□□ 0.36
KCNA1Q09470 HMGN1P19-201ENST00000436976 333 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.27■□□□□ 0.36
KCNA1Q09470 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.27■□□□□ 0.36
KCNA1Q09470 SPCS2P1-201ENST00000561636 679 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 AC104794.3-201ENST00000566840 1248 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.27■□□□□ 0.36
KCNA1Q09470 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KCNA1Q09470 AC112693.3-201ENST00000624819 1983 ntBASIC17.27■□□□□ 0.36
KCNA1Q09470 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNA1Q09470 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.27■□□□□ 0.35
KCNA1Q09470 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNA1Q09470 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
KCNA1Q09470 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KCNA1Q09470 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.27■□□□□ 0.35
KCNA1Q09470 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KCNA1Q09470 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.26■□□□□ 0.35
KCNA1Q09470 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.26■□□□□ 0.35
KCNA1Q09470 AC015922.1-201ENST00000421102 1152 ntBASIC17.26■□□□□ 0.35
KCNA1Q09470 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 RNA5SP421-201ENST00000516864 134 ntBASIC17.26■□□□□ 0.35
KCNA1Q09470 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KCNA1Q09470 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.26■□□□□ 0.35
KCNA1Q09470 RN7SL371P-201ENST00000578099 267 ntBASIC17.26■□□□□ 0.35
KCNA1Q09470 SRD5A3P1-201ENST00000603021 949 ntBASIC17.26■□□□□ 0.35
KCNA1Q09470 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.26■□□□□ 0.35
KCNA1Q09470 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KCNA1Q09470 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KCNA1Q09470 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms