Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.7□□□□□ -0.06
CD47Q08722 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CD47Q08722 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.7□□□□□ -0.06
CD47Q08722 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
CD47Q08722 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CD47Q08722 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD47Q08722 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD47Q08722 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CD47Q08722 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CD47Q08722 AC117489.1-201ENST00000625169 3217 ntBASIC14.7□□□□□ -0.06
CD47Q08722 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 BCAR1-209ENST00000546196 1340 ntBASIC14.69□□□□□ -0.06
CD47Q08722 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.69□□□□□ -0.06
CD47Q08722 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD47Q08722 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD47Q08722 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.69□□□□□ -0.06
CD47Q08722 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 AL590627.1-203ENST00000421194 1026 ntBASIC14.69□□□□□ -0.06
CD47Q08722 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 RPL13AP23-201ENST00000480739 586 ntBASIC14.69□□□□□ -0.06
CD47Q08722 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.69□□□□□ -0.06
CD47Q08722 AC145285.3-201ENST00000564603 959 ntBASIC14.69□□□□□ -0.06
CD47Q08722 AC018845.2-201ENST00000568326 409 ntBASIC14.69□□□□□ -0.06
CD47Q08722 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.69□□□□□ -0.06
CD47Q08722 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CD47Q08722 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CD47Q08722 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD47Q08722 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.69□□□□□ -0.06
CD47Q08722 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CD47Q08722 OR2I1P-210ENST00000642037 4691 ntBASIC14.69□□□□□ -0.06
CD47Q08722 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.69□□□□□ -0.06
CD47Q08722 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CD47Q08722 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CD47Q08722 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD47Q08722 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CD47Q08722 IL9RP2-201ENST00000423948 1312 ntBASIC14.68□□□□□ -0.06
CD47Q08722 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
CD47Q08722 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CD47Q08722 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CD47Q08722 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CD47Q08722 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.68□□□□□ -0.06
CD47Q08722 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms