Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 OR7E47P-204ENST00000575924 449 ntBASIC13.35□□□□□ -0.27
SSBP1Q04837 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 AL009183.1-201ENST00000603760 355 ntBASIC13.35□□□□□ -0.27
SSBP1Q04837 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.35□□□□□ -0.27
SSBP1Q04837 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 AC005840.4-201ENST00000541242 2494 ntBASIC13.35□□□□□ -0.27
SSBP1Q04837 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
SSBP1Q04837 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC13.35□□□□□ -0.27
SSBP1Q04837 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSBP1Q04837 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 AC093827.2-201ENST00000512654 315 ntBASIC13.34□□□□□ -0.27
SSBP1Q04837 PRYP6-201ENST00000514804 343 ntBASIC13.34□□□□□ -0.27
SSBP1Q04837 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC13.34□□□□□ -0.27
SSBP1Q04837 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.34□□□□□ -0.27
SSBP1Q04837 AC021087.4-201ENST00000563761 564 ntBASIC13.34□□□□□ -0.27
SSBP1Q04837 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.34□□□□□ -0.27
SSBP1Q04837 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.34□□□□□ -0.27
SSBP1Q04837 AL732292.2-201ENST00000609649 430 ntBASIC13.34□□□□□ -0.27
SSBP1Q04837 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 AL137784.3-201ENST00000623858 2288 ntBASIC13.34□□□□□ -0.27
SSBP1Q04837 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SSBP1Q04837 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.34□□□□□ -0.27
SSBP1Q04837 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 AC092135.3-201ENST00000624151 1846 ntBASIC13.34□□□□□ -0.27
SSBP1Q04837 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSBP1Q04837 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.34□□□□□ -0.27
SSBP1Q04837 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP1Q04837 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.33□□□□□ -0.27
SSBP1Q04837 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.33□□□□□ -0.27
SSBP1Q04837 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP1Q04837 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
SSBP1Q04837 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP1Q04837 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP1Q04837 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSBP1Q04837 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SSBP1Q04837 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SSBP1Q04837 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms