Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.05□□□□□ -0.16
EFNB1P98172 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 AP3S2-216ENST00000617003 1561 ntBASIC14.05□□□□□ -0.16
EFNB1P98172 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
EFNB1P98172 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
EFNB1P98172 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
EFNB1P98172 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 AC007967.2-201ENST00000432613 625 ntBASIC14.04□□□□□ -0.16
EFNB1P98172 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNB1P98172 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.04□□□□□ -0.16
EFNB1P98172 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNB1P98172 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNB1P98172 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNB1P98172 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.04□□□□□ -0.16
EFNB1P98172 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
EFNB1P98172 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
EFNB1P98172 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
EFNB1P98172 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
EFNB1P98172 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.03□□□□□ -0.16
EFNB1P98172 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNB1P98172 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
EFNB1P98172 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
EFNB1P98172 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
EFNB1P98172 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.03□□□□□ -0.16
EFNB1P98172 KRT8P23-201ENST00000560090 1207 ntBASIC14.03□□□□□ -0.16
EFNB1P98172 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.03□□□□□ -0.16
EFNB1P98172 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.03□□□□□ -0.16
EFNB1P98172 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms