Protein–RNA interactions for Protein: P62820

RAB1A, Ras-related protein Rab-1A, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1AP62820 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB1AP62820 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.9□□□□□ -0.18
RAB1AP62820 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB1AP62820 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB1AP62820 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RAB1AP62820 AL365209.1-201ENST00000624418 6473 ntBASIC13.9□□□□□ -0.18
RAB1AP62820 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RAB1AP62820 AP005117.1-202ENST00000581724 1908 ntBASIC13.9□□□□□ -0.18
RAB1AP62820 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.9□□□□□ -0.18
RAB1AP62820 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB1AP62820 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB1AP62820 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
RAB1AP62820 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RAB1AP62820 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB1AP62820 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
RAB1AP62820 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB1AP62820 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB1AP62820 HIST3H2BA-201ENST00000436555 524 ntBASIC13.89□□□□□ -0.19
RAB1AP62820 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB1AP62820 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB1AP62820 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.89□□□□□ -0.19
RAB1AP62820 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
RAB1AP62820 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.89□□□□□ -0.19
RAB1AP62820 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 AC005498.2-205ENST00000593218 784 ntBASIC13.89□□□□□ -0.19
RAB1AP62820 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.89□□□□□ -0.19
RAB1AP62820 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.89□□□□□ -0.19
RAB1AP62820 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RAB1AP62820 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RAB1AP62820 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.89□□□□□ -0.19
RAB1AP62820 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
RAB1AP62820 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB1AP62820 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
RAB1AP62820 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB1AP62820 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 MIR770-201ENST00000390219 98 ntBASIC13.88□□□□□ -0.19
RAB1AP62820 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB1AP62820 RNA5SP421-201ENST00000516864 134 ntBASIC13.88□□□□□ -0.19
RAB1AP62820 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.88□□□□□ -0.19
RAB1AP62820 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 AL390955.2-201ENST00000603032 514 ntBASIC13.88□□□□□ -0.19
RAB1AP62820 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.88□□□□□ -0.19
RAB1AP62820 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.88□□□□□ -0.19
RAB1AP62820 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.88□□□□□ -0.19
RAB1AP62820 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RAB1AP62820 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms