Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS1BP61024 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.15□□□□□ -0.62
CKS1BP61024 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.15□□□□□ -0.62
CKS1BP61024 AC211429.1-201ENST00000415277 523 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 LINC00265-3P-201ENST00000447588 903 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 TOB2P1-201ENST00000469761 992 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 AC104819.1-201ENST00000504587 486 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS1BP61024 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS1BP61024 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC11.15□□□□□ -0.62
CKS1BP61024 RBM42-202ENST00000586618 771 ntTSL 3 BASIC11.15□□□□□ -0.62
CKS1BP61024 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.15□□□□□ -0.62
CKS1BP61024 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 TERC-201ENST00000602385 541 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.15□□□□□ -0.62
CKS1BP61024 AL121956.5-201ENST00000625261 221 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 AP000867.4-201ENST00000641616 219 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
CKS1BP61024 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
CKS1BP61024 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 SIGLEC16-201ENST00000599858 1437 ntBASIC11.15□□□□□ -0.62
CKS1BP61024 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
CKS1BP61024 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
CKS1BP61024 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
CKS1BP61024 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS1BP61024 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
CKS1BP61024 SUPT20HL2-201ENST00000486479 2409 ntBASIC11.15□□□□□ -0.63
CKS1BP61024 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.63
CKS1BP61024 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
CKS1BP61024 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.15□□□□□ -0.63
CKS1BP61024 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.15□□□□□ -0.63
CKS1BP61024 TOP3BP1-201ENST00000420768 1380 ntBASIC11.15□□□□□ -0.63
CKS1BP61024 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.15□□□□□ -0.63
CKS1BP61024 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC11.15□□□□□ -0.63
CKS1BP61024 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS1BP61024 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS1BP61024 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
CKS1BP61024 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 BLK-205ENST00000529894 2017 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS1BP61024 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CKS1BP61024 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.14□□□□□ -0.63
CKS1BP61024 FP325330.2-201ENST00000624219 5630 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 REXO1L1P-202ENST00000608646 1974 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS1BP61024 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC11.14□□□□□ -0.63
CKS1BP61024 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CKS1BP61024 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC11.14□□□□□ -0.63
CKS1BP61024 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CKS1BP61024 DUX4L17-201ENST00000557360 1267 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 AC074051.2-201ENST00000565115 352 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 AP005901.3-202ENST00000581653 237 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
CKS1BP61024 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 GGT4P-201ENST00000623672 1708 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
CKS1BP61024 AC016734.2-201ENST00000624325 1377 ntBASIC11.14□□□□□ -0.63
CKS1BP61024 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
CKS1BP61024 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.14□□□□□ -0.63
CKS1BP61024 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
CKS1BP61024 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms