Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.85■□□□□ 0.29
RAD23BP54727 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.85■□□□□ 0.29
RAD23BP54727 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.85■□□□□ 0.29
RAD23BP54727 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 UGT1A2P-201ENST00000454886 866 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.85■□□□□ 0.29
RAD23BP54727 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 RNA5SP421-201ENST00000516864 134 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.85■□□□□ 0.29
RAD23BP54727 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.85■□□□□ 0.29
RAD23BP54727 LINC01115-203ENST00000606068 577 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 AC074044.1-201ENST00000609673 707 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 AC004840.1-201ENST00000636359 365 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
RAD23BP54727 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RAD23BP54727 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.85■□□□□ 0.29
RAD23BP54727 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 AC099063.4-201ENST00000641099 1602 ntBASIC16.85■□□□□ 0.29
RAD23BP54727 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RAD23BP54727 AC092127.1-201ENST00000567093 3455 ntBASIC16.84■□□□□ 0.29
RAD23BP54727 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.84■□□□□ 0.29
RAD23BP54727 RPL13P2-201ENST00000440687 659 ntBASIC16.84■□□□□ 0.29
RAD23BP54727 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC16.84■□□□□ 0.29
RAD23BP54727 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.84■□□□□ 0.29
RAD23BP54727 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 AC004461.2-201ENST00000629517 803 ntBASIC16.84■□□□□ 0.29
RAD23BP54727 AF228730.6-201ENST00000641497 218 ntBASIC16.84■□□□□ 0.29
RAD23BP54727 AC084121.3-201ENST00000641716 218 ntBASIC16.84■□□□□ 0.29
RAD23BP54727 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.84■□□□□ 0.29
RAD23BP54727 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.84■□□□□ 0.29
RAD23BP54727 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.84■□□□□ 0.29
RAD23BP54727 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAD23BP54727 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RAD23BP54727 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.83■□□□□ 0.29
RAD23BP54727 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.83■□□□□ 0.29
RAD23BP54727 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.83■□□□□ 0.29
RAD23BP54727 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAD23BP54727 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAD23BP54727 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAD23BP54727 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.83■□□□□ 0.28
RAD23BP54727 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms