Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
SMSP52788 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
SMSP52788 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMSP52788 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
SMSP52788 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
SMSP52788 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMSP52788 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMSP52788 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMSP52788 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
SMSP52788 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.83□□□□□ -0.03
SMSP52788 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMSP52788 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
SMSP52788 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.83□□□□□ -0.03
SMSP52788 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.83□□□□□ -0.04
SMSP52788 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.83□□□□□ -0.04
SMSP52788 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC14.83□□□□□ -0.04
SMSP52788 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.83□□□□□ -0.04
SMSP52788 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
SMSP52788 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.83□□□□□ -0.04
SMSP52788 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SMSP52788 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 SSR4P1-203ENST00000599569 2260 ntBASIC14.82□□□□□ -0.04
SMSP52788 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.82□□□□□ -0.04
SMSP52788 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.82□□□□□ -0.04
SMSP52788 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 AC092580.3-201ENST00000430932 139 ntBASIC14.82□□□□□ -0.04
SMSP52788 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.82□□□□□ -0.04
SMSP52788 SERBP1P5-201ENST00000510079 1181 ntBASIC14.82□□□□□ -0.04
SMSP52788 AP005018.1-201ENST00000525475 301 ntBASIC14.82□□□□□ -0.04
SMSP52788 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 AL359881.2-201ENST00000602973 570 ntBASIC14.82□□□□□ -0.04
SMSP52788 AL662799.1-202ENST00000614205 422 ntBASIC14.82□□□□□ -0.04
SMSP52788 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 AP003680.1-201ENST00000598970 3660 ntBASIC14.82□□□□□ -0.04
SMSP52788 AC020658.6-201ENST00000623564 1870 ntBASIC14.82□□□□□ -0.04
SMSP52788 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.82□□□□□ -0.04
SMSP52788 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.82□□□□□ -0.04
SMSP52788 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SMSP52788 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SMSP52788 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.82□□□□□ -0.04
SMSP52788 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.81□□□□□ -0.04
SMSP52788 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms