Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
CLK1P49759 AC139749.1-202ENST00000617529 3139 ntBASIC14.9□□□□□ -0.02
CLK1P49759 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
CLK1P49759 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
CLK1P49759 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.9□□□□□ -0.02
CLK1P49759 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 AP000347.1-202ENST00000435868 847 ntBASIC14.9□□□□□ -0.02
CLK1P49759 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.9□□□□□ -0.02
CLK1P49759 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.9□□□□□ -0.02
CLK1P49759 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 REXO1L8P-201ENST00000604378 1897 ntBASIC14.9□□□□□ -0.02
CLK1P49759 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.9□□□□□ -0.02
CLK1P49759 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.9□□□□□ -0.02
CLK1P49759 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
CLK1P49759 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.9□□□□□ -0.02
CLK1P49759 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.89□□□□□ -0.03
CLK1P49759 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
CLK1P49759 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 RARRES2P8-201ENST00000566335 367 ntBASIC14.89□□□□□ -0.03
CLK1P49759 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.89□□□□□ -0.03
CLK1P49759 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 CICP4-201ENST00000447359 2812 ntBASIC14.89□□□□□ -0.03
CLK1P49759 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 AC007292.2-201ENST00000593524 1812 ntBASIC14.89□□□□□ -0.03
CLK1P49759 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 AL109954.1-202ENST00000564051 2148 ntBASIC14.89□□□□□ -0.03
CLK1P49759 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
CLK1P49759 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
CLK1P49759 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 AC092919.2-201ENST00000623631 1645 ntBASIC14.88□□□□□ -0.03
CLK1P49759 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.88□□□□□ -0.03
CLK1P49759 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLK1P49759 CICP24-201ENST00000605464 2705 ntBASIC14.88□□□□□ -0.03
CLK1P49759 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLK1P49759 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms