Protein–RNA interactions for Protein: P49354

FNTA, Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNTAP49354 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 AC023024.2-201ENST00000623561 1993 ntBASIC16.4■□□□□ 0.22
FNTAP49354 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 KRT8P37-201ENST00000451609 1420 ntBASIC16.4■□□□□ 0.22
FNTAP49354 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 FAM220BP-201ENST00000377689 816 ntBASIC16.4■□□□□ 0.22
FNTAP49354 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
FNTAP49354 AC142381.1-201ENST00000426099 345 ntBASIC16.4■□□□□ 0.22
FNTAP49354 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.4■□□□□ 0.22
FNTAP49354 KRT18P2-201ENST00000447938 1258 ntBASIC16.4■□□□□ 0.22
FNTAP49354 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.4■□□□□ 0.22
FNTAP49354 PHKG1P2-201ENST00000457537 863 ntBASIC16.4■□□□□ 0.22
FNTAP49354 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.4■□□□□ 0.22
FNTAP49354 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 AC034105.1-201ENST00000563488 319 ntBASIC16.4■□□□□ 0.22
FNTAP49354 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.4■□□□□ 0.22
FNTAP49354 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.4■□□□□ 0.22
FNTAP49354 AC008267.7-201ENST00000624570 1194 ntBASIC16.4■□□□□ 0.22
FNTAP49354 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
FNTAP49354 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
FNTAP49354 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FNTAP49354 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.4■□□□□ 0.22
FNTAP49354 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
FNTAP49354 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC16.39■□□□□ 0.22
FNTAP49354 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC16.39■□□□□ 0.22
FNTAP49354 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.39■□□□□ 0.21
FNTAP49354 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 AL359183.1-201ENST00000623796 2132 ntBASIC16.39■□□□□ 0.21
FNTAP49354 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 ZEB1-AS1-208ENST00000607166 2503 ntBASIC16.39■□□□□ 0.21
FNTAP49354 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
FNTAP49354 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.39■□□□□ 0.21
FNTAP49354 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.39■□□□□ 0.21
FNTAP49354 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.39■□□□□ 0.21
FNTAP49354 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 SLC25A6P4-201ENST00000586535 553 ntBASIC16.39■□□□□ 0.21
FNTAP49354 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.39■□□□□ 0.21
FNTAP49354 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
FNTAP49354 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.39■□□□□ 0.21
FNTAP49354 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FNTAP49354 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FNTAP49354 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.39■□□□□ 0.21
FNTAP49354 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FNTAP49354 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.39■□□□□ 0.21
FNTAP49354 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms