Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1DP48730 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1DP48730 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CSNK1DP48730 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 AC092850.2-201ENST00000623821 2697 ntBASIC15.69■□□□□ 0.1
CSNK1DP48730 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.69■□□□□ 0.1
CSNK1DP48730 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.69■□□□□ 0.1
CSNK1DP48730 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CSNK1DP48730 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CSNK1DP48730 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 AC087481.3-201ENST00000602886 1894 ntBASIC15.68■□□□□ 0.1
CSNK1DP48730 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.68■□□□□ 0.1
CSNK1DP48730 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.68■□□□□ 0.1
CSNK1DP48730 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 AC011495.1-201ENST00000498085 584 ntBASIC15.68■□□□□ 0.1
CSNK1DP48730 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.68■□□□□ 0.1
CSNK1DP48730 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.68■□□□□ 0.1
CSNK1DP48730 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CSNK1DP48730 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CSNK1DP48730 AL359711.2-201ENST00000563105 872 ntBASIC15.68■□□□□ 0.1
CSNK1DP48730 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CSNK1DP48730 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.68■□□□□ 0.1
CSNK1DP48730 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.68■□□□□ 0.1
CSNK1DP48730 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1DP48730 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.67■□□□□ 0.1
CSNK1DP48730 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1DP48730 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1DP48730 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.67■□□□□ 0.1
CSNK1DP48730 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1DP48730 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
CSNK1DP48730 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CSNK1DP48730 SOCS2P1-201ENST00000417727 557 ntBASIC15.67■□□□□ 0.1
CSNK1DP48730 NME2P1-201ENST00000426182 414 ntBASIC15.67■□□□□ 0.1
CSNK1DP48730 AL162726.2-201ENST00000438986 1017 ntBASIC15.67■□□□□ 0.1
CSNK1DP48730 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.67■□□□□ 0.1
CSNK1DP48730 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.67■□□□□ 0.1
CSNK1DP48730 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms